CDS
Accession Number | TCMCG010C13766 |
gbkey | CDS |
Protein Id | XP_016566170.1 |
Location | join(245824596..245824664,245827064..245827186,245828028..245828185,245830433..245830477,245831057..245831135,245831216..245831289,245831454..245831560,245832989..245833171,245833786..245833989,245834068..245834284,245834369..245834443,245834597..245834928,245835271..245835469,245835557..245835809,245835883..245836222,245836386..245836566,245836673..245836813,245836918..245837179,245837314..245837730,245838741..245839204,245840395..245840531,245840628..245840809,245840892..245841248,245841555..245841680,245841920..245841985,245842072..245843870,245843955..245844234,245844503..245844736,245845610..245846122,245846298..245846460,245847055..245847308) |
Gene | LOC107864335 |
GeneID | 107864335 |
Organism | Capsicum annuum |
Protein
Length | 2677aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA319678 |
db_source | XM_016710684.1 |
Definition | PREDICTED: small subunit processome component 20 homolog isoform X1 [Capsicum annuum] |
EGGNOG-MAPPER Annotation
COG_category | V |
Description | Small subunit processome component 20 homolog |
KEGG_TC | - |
KEGG_Module | - |
KEGG_Reaction | - |
KEGG_rclass | - |
BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
KEGG_ko |
ko:K14772
[VIEW IN KEGG] |
EC | - |
KEGG_Pathway | - |
GOs | - |
Sequence
CDS: ATGGCGACACATTCAGATGCATACGCAGTTAAATCTCTCAACAAATCTCCCGGTCGTCGCCGTTTCACTTTCGAGACATTTTCGGAGCGGATTGAGGATGTTGACATTGATGTGTACAGAAATCTTGACCCTTTAAAAGCTGAGCCCTCTGGAGGTTCCTCCTTCTTCCGGGATTGCCTTACGGAATGGAGAGAATTAAACACTGCTGAGGATTTTATTTCATTTTACGAGGAAATATTTCCCTTGGTACAGACGCTACCGCAAATTATACTGCAGAAGGAACTGATTGTCACAAAACTTCTTTCGAGATTGGACATGACAGGGAGATTATCCCTTGAGCCAATCCTCGGGTTGATTGCAGCCTTATCTAGAGATCTCCTGGAGGACTTCTTACCGTTTCTCCGGAGGATTGCTGACTCTTTGGAGTGTCTTCTCAAAAGTGGTGCTGATAGAGAACCAGTTATAATTGAGCAGATTTTCAAGTCATGGTCTTGTATTATGATGTACCTGCAAAAATATCTTGTTAAAGATGTTGTTGATGTTCTAAAGGTAACAGTACAATTAAGATATTATTCCAAGGAGTACGTCCATGAATTTATGGCTGACTCAGTATCATTCATATTGAGAAATGCTCCTGTTAAGCAGCTTATAAAAGGAGTGAGGAAGCTTATGTTTGAAGTTGCAAAGAAGCCATTGGAAATAAGAAAGTCTGCTGTCAGTTCACTATTGTGGTATGTTGTGAGAGGAAGCTCGTCCAGGTTACACTCAAGGGCTGAACAAGTGTTACGCCTACTGGTTGACAAGTCTCTGTTTGTTATAGGTGATCAGTTCACAGGGGGTGCTGAGGCCATTCTTCAAGTTCTTATTCTAACACTGCAGAGGTTATGTGAGGAATTGGAAGCTACTGAGTTGGAGTTGATGTGGGTTTGCTTATATGAGGAGATAACTGAGTGTGTATCTCACAGCCAGCTATTGCACCTTGGTCGCCTTTTGTCCCTTCTTGTTTCTACCCTGCAAGTTAGTTACATTCAAAAAATTTCTGATTACCAAGGGGTGCTTCAATTGATCCAGTTACTTGTACAGACTTACATTCTGCCTTATCCTAATGTGAAAGCGATTGATCAAACATCAAACATTATTGACAAAGTCATGCAGTCAATGCTTTGCATTCTTGACGGTCTATATAGAGCAAATAATATTTCCACTCTCTCTTCGGTTTCGATGCAATGGGCTCCTGTGTTTGAATTGAGGAATAAAAGTTTGCTGTCTTTTCTCGAAGATATTCTACTGAAGGACCCTTGCATTGTTCATTTCTTTAGAACTATCATTATAAGTGCATTAAATGATATGATAGAGATTTCAGAAGAAGAGGTTATACATTTGCTGCAGATCTTTTTTAAGAGGCTGCCAGTACCAGGACATAGCTTCTTGGATGAGGTTCCAAAAGAGAAGCTTTCAAGAATTCACATTTTTCTCCAAGAAGCCATTGGTCGCTGGATTCAGCGTATACAAAAGGAACCATATTCTACCCAAATTGAAGAAAATGACTTAGCCATACTGTGGGGAATCATAGGCTGCTATCCTTATATACTAGGTGGTTCAGTGAATGAGTCATTGCTAATGGACTTGGTTAATGCTCTAGATGAGCTTTTGAGTACTGAATCTGCTAACATTGCTGGGCATCCCAGAACTACCTGGCAGAGCTTGGTTGGTGCTGCATTGGGGTCTTATATCAAGTCACTGGACAATCAAAAATCAAGATGTGATGATTCTGTCGTAAGCAGGTTCTTAGATCTGGCAAGGAAGCACAAGACATGTTCTCAAGTGTTGTCTGCAGTAGCTGATCTCTTGGATTCAGTTTGTGGGTCCATAATCCAAGCTGATACAAGCGATAAAAAGCATCATCCAGAACTTGTAGTGAGTAAATTGGTGGATGCCTTAGGCGTGTTTGCTGCAAATTTGAGCCACCACGACAAGAAGTTGCGTCTTTCGACCTTGAGAATATTGTGCCACTACGAACCGTTGACTGAAGTCAGTTGTACTAATGAACAACCCCTTGAGAAGAAAATGAGATTGGATAATCCTCAGACTACTCTTGTGGACTACCATGCCAATAATGTGATTCATCTCCTACTTTTGATTGAAGAAACACCTCTTTCCATTGCAACCAGTAGAAAAGTCATCCTACTGATATCCAAAATACAGATGAGTTTATCTGCTGGAAGGGTAGCTGAAGAGTATATGCCTGTTGTTCTTAGTGGAATTATTGGGATCTTTCATAACCGTTTTAGCTATTTGTGGAACCCGACATTGGACTGCATAGCTGTCCTCCTCGGTCAATACTTTGGGCTGTTGTGGGATAGATATATTGAGTACCTTGGTCATTATCTGTCAGTTTTTCTGGGTTCTCATGATGAAGCTTCTCAAAGCAAGGGGGAATTGTTAGAGACAGCTAATAATTTGAATGGAAGCTTCAGGTCTTATGTCTCTCCAGGGTCTGATGGTGCGTCGTGTGCAACAATTTTTTCTTTATTGATTCAGTGCTTGCAGAGAATTCCTTCTGTTGCTGAATCACGTTCACGACAAATCATACCGCTGTTCTTGAAGTTCCTAGGCTATGATATTGAAGATGTTAAGAGTGTGGATTTATACAATCAGGAGCGTTGTAAGGGGAAAGAGTGGAAAAGCGTTCTTCAAGAATGGTTGTCCTTATTTAGACTGATGCGAAACCCTAGATCTTTTTATCTCAATCAATTCTTCAAGGAGGTTTTGATGTACAGACTTCTTGAGGAAGATGATGCTGACTTGCAAACTAAGGTCCTTGATTGCCTATTAAATTGGAAAGATGACTTCTTACTTCCGTATAATCAGCATCTAAAAAATCTGATCAATTCAAAAAGTTTGAGGGAGGAGCTCACGACATGGAGCTTATCTAGGGAATCAAATCTTGTTGATACAAGGCATAGAACCTTCCTTGTGCCTGTTGTTATCAGAGTACTGGCTCCTAAAGTCAGAAAGTTAAAGGCACTTGCTTCTCGTAAGCATGCAAGTGTCCATCATCGAAAGGCGATTCTTGGCTTCTTAGCGCAGCTAGATGTTGAAGAACTTCCTCTTTTCTTTGCCTTGCTGATAAAACCCCTTGTATCTGCTTCACAAGGTGCTGCAGCAAAGAGAGCGACTACACCTGAAACTCTAAAGCATGGGTTTGACTCATTTAGTGTCTTGGAGCATTTTTCCAGAGATTGCATCGACACCATTTCATGGAAGAAGAGATATGGTTTTCTACATGTAGTTGAGGATATTGTAGCTGTTTTTGATGAAGTGCACATTAGCCCTTTTCTTGATTTGTTAATGGGATGTATTGTACGCCTCTTGGACAGCTGTACATCAACTCTTGAAGGCACAAGAAATGATAGGGGGCTGGCCGATCATGGTCACCAAGTAGAGGATAAAATCATGACAAACATGGCTGCAAAGCAATGCAAGGATTTGAGATCTTTATGCCTGAAGATCATCTCTTTTATACTTAGCAAATACGAAGATCATGATTTCTGCCCTGAATTTTGGGATTTGTACTTTATGTCAGTAAAACCCTTAGTTGCTAATTTCAAACAGGAAGGCACTAGTAGCGAGAAGCCAAGCTCGTTATTTTCTTGTTTTCTGGCTATGAGTAGAAGTTCCAAACTTGTGCCTCTGCTGTCCCGAGAAAAGAATCTTGTACCTGATATATTTTCGATGCTAGCAGTCTCAACAGCATCGGATACCATCATTTCCTCGGTTCTCAAGTTTGTGGAGAATCTGTTGAATCTTGATGTTGAGCTGGGTAATGAAAACAACCTGCTTAGGAGATTACTGCTTCCTCACATTGATGTGCTAGTATGCAGTTTGCATAGTCTTTTTGTACATGATGGTGCACCTAAGAGGAAGATTGTCAATTATCCTGGGGAAAAAGAGCTCAGTGTTTTCAAGCTTTTATCAAAGCACATAAAGGGGCCGTTGGCTGCAAGAAAGTTTCTTGATATCTTGCTTCCGCTTCTGTCAAAGAGATCCAAAGACCCTGAGATTTGTGTAGGCACTTTACAGATTATCAAGGATATCGTAGAACCATTGGGTAGTGAAAGCAGTAAAAAGATAATCAAATCTATTTCTCCACTCGTAATTTCTGCTAGCTTGGATGCCCGCACCTCTATTTGTGATGTTCTTGATGCTGTCGCAGCTAATGATTCTTCTGTACATTCTACGGCAAAGCTTCTTCGTGATTTGAATGCCACGTCTACTGTAGAGTTGGGAGATCTCGATTATGATACCGTAATTGCTGCTTATGAAAGGATAGGTGCAGATTTTTTCCACACTGTCCCAGAAGAGCATGCATTGATTATTCTGTCACATGCTGTACATGATATGTCATCTGAGGATCTTATTTTGAGGCAGAGTGCATATAGATTGTTGCTTTCATTTGTCGAGTTTTCTAGTCAAATGCTTGATAGAGAGCTGAAATCTGAACATGGATCTCCTGGAGCCTGGGTTAGGCATATCCTAAGCAACTTCTTTTTGAAGCACATAGGTACTGCGATGAACAAAGAAGATTCAATCCAGAAGGTATGGATCGATCTACTTCGAGATATGGTCCTGAAGCTTCCAACAGTAGAAGACTTCAAATCATTTGCAGTTCTTTACAGTGCAGATCCAGAGCAGGACTTTTTCAACAATATTGTGCATTTGCAAAGACACAGGAGAGCGAGGGCTTTGTTACGCTTTAAGAATGTCATCAGTTCTGGAAATTTGTCTAAGGTTCTCATAAATAAAGTGTTTATCCCTCTTCTTTTCAAAATGTTGCTTGATGGTCAAATTGGAAAGGGTGAAAATATTAGAAGCGCATGTTTGGAAGCTGTTGGATCAATTTCTAAATTCTTGGAGTGGAGATCGTATTATGCATTACTCAATAGATGCTTTCGGGAGATGATACTGAAACCAGATAAACAAAAGGTGTTATTGAGGTTAATAAGCTCCATTTTGGACCAGTTCCATTTCTCAGAGACTCCTCCTGATAATGATACCGAGGATTCTATGCAAGATATTCAGAATACGTGTTTGATAGAGTCGGGCAAAGTCAGCGAACTTGCGGAAATAAAAATGTGCCTCCAAAAGGATGTGCTTCCCAGGGTACACAAAATGTTGACTGCTGATACGGATAATCTCAATGTAAACATCAGTCTAATTCTGCTCAAGTTGCTCAAGCTACTTCCTGGAGACATCATGGAATTGCACCTTCCATCTATAGTGCATCGCATCGCGAATTTCCTTAAGAATCGTTTGGAAAGTGTTCGTGATGAAGCTAGAGCTGCTTTGGCTGCTTGTTTAAAAGAACTAGGGCTGGAGTACTTGCAATTTGTTGTCAAAGTTTTGAAAGGCACTCTGAAGAGAGGATTTGAATTGCACGTTTTGGGATTCACTCTCAATTTTCTGCTGTCAAAATTTCTTCTTAATCCCAGTAGTGGGAAGTTGGATTATTGTTTAGAGGATCTTCTCTCAATTGCAGTAAATGATATACTTAGTGATGTTTCGGAGGAGAAAGAGGTTGAAAAGATTGCTTCAAAGATGAAAGAGACTAGGAAGCAAAAGTCATATGATACTCTCAAATTGATCGCCCAAAGCGTCACATTCAAAACACATGCTCTGAAGCTGCTTGCGCCAATTCTTAGTCATTTACAAAAGCAGCTGACTCCAAAAGTAAAAACAAAATTGGAGAATATGTTGTCTCATATAGCTGCTGGAATACAGTGTAATCCTTCTGTAAACCAGACGGAACTCTTTATCTTTGGATATGGTCTAATTAAAGATGGCATAAGAGATGAATCTCCTGGGCATGCAGAGTCATCGACTTTAATGGAAAGTAAGCAAAAGAAAGATGGAGTAAGCAGCCAGATTGATAAATCAGATAAGTTAGTCGGCATTGATCCACGATATTCCCATCTTATTACTGAATTTTCTCTTGGAGTGCTTCAAAATTACATGAAGAACATGAAATTTGACAAGAAAGATGAGCAGTTGTTGTCAATGCTAGATCCATTTGTAAGATTATTGAGTGAATGCTTGAACTCAAAATATGAGAATGTCATGTCTGCCTCGCTTAGGTGCTTATCTCCTGTGGTGAGGCTCCCTTTGCCATCACTTGAATCTCAGGCTGAGAAGATAAAGAATTCATTACTGAATATTGCTCAAGGTTCAGTAACTTCCAGTAATCCATTGTTGGAGTCTTGCGTTAAGTTGCTAACTGTGCTTTTGCGTAGCACTAAGATCACACTTTCTACGGATCAACTTCATATGCTAATCCAGTTTCCCCTTTTTGTTGATCTTGAAAGAAATCCTTCTTTTGTGGCTCTCTCACTGTTGAAAGCAATAGTGAGTAGGAAATTGGTAGTTGCAGAAATCTATGATATAGTTAAACGTGTTGCAGAGTTAATGGTGACTAGTCAAGTTGAATCAATTCGTAAGAAAAGCAGCCAAATTTTGCTGCAGTTTTTACTGGACTACCATATATCAGAGAAACGTCTACAACAGCATCTTGATTTCTTACTTTCAAACTTAAGATATGAGCATTCAACTGGAAGAGAAGCCATCCTTGAAATGCTCCATGCTATTATAATGAAATTTCCAGTTAGCATCATAGATGAACAATCTCAGATGTTTTTTCTTCATTTGGTGGTTTGTCTGGCGAATGACCGTGACAACAGAGTCCGCTCAATGACTGGTACAGTCATTAAGTTACTTGTTGGGCGAGTCAGCCCCCGTTCGCTCCAGTCAATTCTTGAGTTTAGTCGGTCCTGGTATCTGGGAGATAAACCACATTTATGGAGTGCCGCAGCACAGGTTTTGGGGTTACTCATTGAGGTACTTAAAGATGGTTTCCAAAAGTATATTGATAGCCTCTTGCCTGTTGTGAGAAACATCTTGCAATCTGCTGTTAATGTTCCTACAAATAAGCAAGTGGATCTACCCAATGATGGTACGATTTCATCTTGGAAAGAAGCATATTATTCACTGGTTCTGTTTGAGAAGATAATAAATCAATTTCCTAGATTGTGCTTCAGAAAGGATCTTGAGGATCTGTGGGAAGCAATCTGCGAGTTGCTTTTGCATCCGCATCTGTGGTTGCGCAACATATCAAACCGTCTTGTAGCTTGCTACTTTGCCACTGTGACTGAGGATTGTAAAGGGAACCTTGAACTGCGACAAGGAACTTACATTTTGATGAGGCCAAGTGGACTTTTCTTCATAGCTACTTCTCTTTGTTGTCAGCTGAAGGTGCTGCAGACTGATGCTGCTGCCAGTGATCTCATTTTTCAAAATCTCGTCTTTTCAATTTGCACTCTTCATTCATTCTTAGGAAAAAATGAATATAAAGATCGAGACAAGTTCTGGTCAACCCTTGAACATGATGAGCAGGGTCTTCTACTTAAGGCATTTCAACAGCTCGACTCAAGGAAAGGGAAAAACATCTATTTATCTCTCGTGTCCGACATTAGCGACCAAGAAGAAGAAAGCCAGCGCTACTTGGTCATTTCCTATTTGCTTAAGACAATGGGAAAGATTTCCCTTCATGTGGAGGATATGCAGATGAAAATTATCTTCAATTGTTTCAAATCAGTTTCACCAAAGCTTATAGATCCGAGTAGATTGTTGTCCCCTGAAGGTGAGGTTGATTGCCAAAGCTTTGCATATCATATGCTGTTTCCCCTGTACAAAGTTTGTGAAGGATTTGCCGGAAAAGTTATATCAGACGACGTGAAACAAATGGCTGAAGAAGTGCGGGGGAGCATAAGCAAAGTTATAGGAATGCAGAGTTTTGTCCAAATCTACAGTCATATAAGGAAGAGTATCAAATCCAAGAGGGATAAGAGGAAACAAGAAGAGAAGGTCATTGCTGTGGTTAATCCAATGAGAAATGCAAAGAGGAAGCTGAGGATTGCAGAAAAGCATAAAGCACACAAGAAAAGGAAAATGATGACAATGAAGATGGGAAGATGGATGTAG |
Protein: MATHSDAYAVKSLNKSPGRRRFTFETFSERIEDVDIDVYRNLDPLKAEPSGGSSFFRDCLTEWRELNTAEDFISFYEEIFPLVQTLPQIILQKELIVTKLLSRLDMTGRLSLEPILGLIAALSRDLLEDFLPFLRRIADSLECLLKSGADREPVIIEQIFKSWSCIMMYLQKYLVKDVVDVLKVTVQLRYYSKEYVHEFMADSVSFILRNAPVKQLIKGVRKLMFEVAKKPLEIRKSAVSSLLWYVVRGSSSRLHSRAEQVLRLLVDKSLFVIGDQFTGGAEAILQVLILTLQRLCEELEATELELMWVCLYEEITECVSHSQLLHLGRLLSLLVSTLQVSYIQKISDYQGVLQLIQLLVQTYILPYPNVKAIDQTSNIIDKVMQSMLCILDGLYRANNISTLSSVSMQWAPVFELRNKSLLSFLEDILLKDPCIVHFFRTIIISALNDMIEISEEEVIHLLQIFFKRLPVPGHSFLDEVPKEKLSRIHIFLQEAIGRWIQRIQKEPYSTQIEENDLAILWGIIGCYPYILGGSVNESLLMDLVNALDELLSTESANIAGHPRTTWQSLVGAALGSYIKSLDNQKSRCDDSVVSRFLDLARKHKTCSQVLSAVADLLDSVCGSIIQADTSDKKHHPELVVSKLVDALGVFAANLSHHDKKLRLSTLRILCHYEPLTEVSCTNEQPLEKKMRLDNPQTTLVDYHANNVIHLLLLIEETPLSIATSRKVILLISKIQMSLSAGRVAEEYMPVVLSGIIGIFHNRFSYLWNPTLDCIAVLLGQYFGLLWDRYIEYLGHYLSVFLGSHDEASQSKGELLETANNLNGSFRSYVSPGSDGASCATIFSLLIQCLQRIPSVAESRSRQIIPLFLKFLGYDIEDVKSVDLYNQERCKGKEWKSVLQEWLSLFRLMRNPRSFYLNQFFKEVLMYRLLEEDDADLQTKVLDCLLNWKDDFLLPYNQHLKNLINSKSLREELTTWSLSRESNLVDTRHRTFLVPVVIRVLAPKVRKLKALASRKHASVHHRKAILGFLAQLDVEELPLFFALLIKPLVSASQGAAAKRATTPETLKHGFDSFSVLEHFSRDCIDTISWKKRYGFLHVVEDIVAVFDEVHISPFLDLLMGCIVRLLDSCTSTLEGTRNDRGLADHGHQVEDKIMTNMAAKQCKDLRSLCLKIISFILSKYEDHDFCPEFWDLYFMSVKPLVANFKQEGTSSEKPSSLFSCFLAMSRSSKLVPLLSREKNLVPDIFSMLAVSTASDTIISSVLKFVENLLNLDVELGNENNLLRRLLLPHIDVLVCSLHSLFVHDGAPKRKIVNYPGEKELSVFKLLSKHIKGPLAARKFLDILLPLLSKRSKDPEICVGTLQIIKDIVEPLGSESSKKIIKSISPLVISASLDARTSICDVLDAVAANDSSVHSTAKLLRDLNATSTVELGDLDYDTVIAAYERIGADFFHTVPEEHALIILSHAVHDMSSEDLILRQSAYRLLLSFVEFSSQMLDRELKSEHGSPGAWVRHILSNFFLKHIGTAMNKEDSIQKVWIDLLRDMVLKLPTVEDFKSFAVLYSADPEQDFFNNIVHLQRHRRARALLRFKNVISSGNLSKVLINKVFIPLLFKMLLDGQIGKGENIRSACLEAVGSISKFLEWRSYYALLNRCFREMILKPDKQKVLLRLISSILDQFHFSETPPDNDTEDSMQDIQNTCLIESGKVSELAEIKMCLQKDVLPRVHKMLTADTDNLNVNISLILLKLLKLLPGDIMELHLPSIVHRIANFLKNRLESVRDEARAALAACLKELGLEYLQFVVKVLKGTLKRGFELHVLGFTLNFLLSKFLLNPSSGKLDYCLEDLLSIAVNDILSDVSEEKEVEKIASKMKETRKQKSYDTLKLIAQSVTFKTHALKLLAPILSHLQKQLTPKVKTKLENMLSHIAAGIQCNPSVNQTELFIFGYGLIKDGIRDESPGHAESSTLMESKQKKDGVSSQIDKSDKLVGIDPRYSHLITEFSLGVLQNYMKNMKFDKKDEQLLSMLDPFVRLLSECLNSKYENVMSASLRCLSPVVRLPLPSLESQAEKIKNSLLNIAQGSVTSSNPLLESCVKLLTVLLRSTKITLSTDQLHMLIQFPLFVDLERNPSFVALSLLKAIVSRKLVVAEIYDIVKRVAELMVTSQVESIRKKSSQILLQFLLDYHISEKRLQQHLDFLLSNLRYEHSTGREAILEMLHAIIMKFPVSIIDEQSQMFFLHLVVCLANDRDNRVRSMTGTVIKLLVGRVSPRSLQSILEFSRSWYLGDKPHLWSAAAQVLGLLIEVLKDGFQKYIDSLLPVVRNILQSAVNVPTNKQVDLPNDGTISSWKEAYYSLVLFEKIINQFPRLCFRKDLEDLWEAICELLLHPHLWLRNISNRLVACYFATVTEDCKGNLELRQGTYILMRPSGLFFIATSLCCQLKVLQTDAAASDLIFQNLVFSICTLHSFLGKNEYKDRDKFWSTLEHDEQGLLLKAFQQLDSRKGKNIYLSLVSDISDQEEESQRYLVISYLLKTMGKISLHVEDMQMKIIFNCFKSVSPKLIDPSRLLSPEGEVDCQSFAYHMLFPLYKVCEGFAGKVISDDVKQMAEEVRGSISKVIGMQSFVQIYSHIRKSIKSKRDKRKQEEKVIAVVNPMRNAKRKLRIAEKHKAHKKRKMMTMKMGRWM |